Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | FD722_02160 | Not Available | + | 467824 - 469605 | 65459.8 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | FD722_02165 | Not Available | + | 469598 - 471319 | 63444.8 |
| leucyl/phenylalanyl-trna--protein transferase | FD722_02170 | Not Available | + | 471495 - 472208 | 26834.8 |
| arginyltransferase | FD722_02175 | Not Available | + | 472212 - 472904 | 27149.2 |
| translation initiation factor if-1 | FD722_02180 | Not Available | + | 473104 - 473322 | 8219.13 |
| atp-dependent clp protease atp-binding subunit clpa | FD722_02185 | Not Available | - | 473455 - 475719 | 83637.1 |
| atp-dependent clp protease adapter clps | FD722_02190 | Not Available | - | 475764 - 476084 | 12245.8 |
| cold shock domain-containing protein cspd | FD722_02195 | Not Available | + | 476342 - 476563 | 8084.45 |
| nadp-dependent isocitrate dehydrogenase | FD722_02200 | Not Available | - | 476989 - 478242 | 45688.8 |
| pseudouridine synthase | FD722_02205 | Not Available | + | 478385 - 479032 | 24669.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.