Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | FD722_01855 | Not Available | + | 391926 - 394145 | 83949.5 |
| formate dehydrogenase accessory sulfurtransferase fdhd | FD722_01860 | Not Available | + | 394178 - 395008 | 30396.7 |
| hydrogenase maturation nickel metallochaperone hypa | FD722_01865 | Not Available | + | 395022 - 395363 | 12384.1 |
| hydrogenase nickel incorporation protein hypb | FD722_01870 | Not Available | + | 395364 - 396377 | 37534.5 |
| porin family protein | FD722_01875 | Not Available | + | 396533 - 397141 | 21849.2 |
| ydiu family protein | FD722_01880 | Not Available | - | 397202 - 398677 | 55996.6 |
| class a beta-lactamase | FD722_01885 | Not Available | + | 398875 - 399744 | 31724.3 |
| mannosylglycerate hydrolase | FD722_01890 | Not Available | - | 399801 - 402455 | 101335.0 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | FD722_01895 | Not Available | - | 402612 - 404546 | 68220.0 |
| gntr family transcriptional regulator | FD722_01900 | Not Available | + | 404805 - 405524 | 27529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.