Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | FD722_01805 | Not Available | + | 381008 - 381616 | 21309.7 |
| hydrogenase 4 subunit b | FD722_01810 | Not Available | + | 381823 - 383535 | 61072.0 |
| hydrogenase 3 membrane subunit | FD722_01815 | Not Available | + | 383535 - 384488 | 34780.3 |
| hydrogenase large subunit | FD722_01820 | Not Available | + | 384498 - 386243 | 66263.4 |
| 4fe-4s dicluster domain-containing protein | FD722_01825 | Not Available | + | 386253 - 386801 | 20573.6 |
| nadh-quinone oxidoreductase subunit nuob | FD722_01830 | Not Available | + | 386798 - 387661 | 31006.4 |
| formate hydrogenlyase maturation protein hych | FD722_01835 | Not Available | + | 387671 - 388162 | 18610.2 |
| hydrogenase maturation peptidase hyci | FD722_01840 | Not Available | + | 388159 - 388698 | 19118.0 |
| 4fe-4s dicluster domain-containing protein | FD722_01845 | Not Available | + | 388961 - 389506 | 19449.7 |
| formate dehydrogenase subunit alpha | FD722_01850 | Not Available | + | 389541 - 391685 | 79091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.