Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | FD722_20510 | Not Available | - | 4494229 - 4494477 | 9297.32 |
| 4-hydroxybutyrate coa-transferase | FD722_20515 | Not Available | - | 4494478 - 4494726 | 8914.73 |
| type ii secretion protein | FD722_20520 | Not Available | + | 4494727 - 4494974 | 9066.09 |
| integrase | FD722_20525 | Not Available | - | 4495227 - 4495412 | 6842.13 |
| phosphomannomutase | FD722_20530 | Not Available | - | 4495468 - 4495711 | 8870.31 |
| gntr family transcriptional regulator | FD722_20535 | Not Available | - | 4495956 - 4496198 | 9116.85 |
| abc transporter atp-binding protein | FD722_20540 | Not Available | + | 4496199 - 4496441 | 8979.79 |
| tigr03643 family protein | FD722_20545 | Not Available | - | 4496442 - 4496607 | 6592.96 |
| hypothetical protein | FD722_20550 | Not Available | - | 4496684 - 4496925 | 8529.57 |
| hypothetical protein | FD722_20555 | Not Available | + | 4496926 - 4497166 | 8501.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.