Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase family protein | FD722_19775 | Not Available | + | 4405672 - 4406799 | 42830.1 |
| glycosyltransferase family 4 protein | FD722_19785 | Not Available | - | 4407030 - 4408088 | 39819.9 |
| glycosyltransferase | FD722_19790 | Not Available | - | 4408098 - 4409084 | 36866.5 |
| capsular biosynthesis protein | FD722_19795 | Not Available | - | 4409088 - 4410458 | 51016.1 |
| hypothetical protein | FD722_19800 | Not Available | + | 4411540 - 4411821 | 10681.9 |
| voc family protein | FD722_19805 | Not Available | - | 4411805 - 4412188 | 14156.3 |
| yaii/yqxd family protein | FD722_19810 | Not Available | - | 4412220 - 4412672 | 16642.0 |
| duf3413 domain-containing protein | FD722_19815 | Not Available | - | 4412795 - 4414543 | 67404.9 |
| is66 family transposase | FD722_19820 | Not Available | - | 4414645 - 4416189 | 58370.2 |
| is66 family insertion sequence element accessory protein tnpb | FD722_19825 | Not Available | - | 4416250 - 4416603 | 13693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.