Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, class i | FD722_19410 | Not Available | + | 4324753 - 4325952 | 43811.8 |
| phospholipase | FD722_19415 | Not Available | + | 4326236 - 4327090 | 32597.9 |
| pts fructose transporter subunit iic | FD722_19420 | Not Available | + | 4327542 - 4329446 | 65681.7 |
| Trna-asp | Not Available | Not Available | + | 4329732 - 4329808 | Not Available |
| Trna-trp | Not Available | Not Available | + | 4329844 - 4329920 | Not Available |
| hth-type transcriptional activator ilvy | FD722_19435 | Not Available | - | 4330035 - 4330913 | 32466.3 |
| ketol-acid reductoisomerase | FD722_19440 | Not Available | + | 4331041 - 4332528 | 55021.7 |
| accessory factor ubik family protein | FD722_19445 | Not Available | - | 4332603 - 4332863 | 10000.0 |
| multidrug efflux rnd transporter permease subunit | FD722_19450 | Not Available | - | 4333004 - 4336123 | 112635.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD722_19455 | Not Available | - | 4336136 - 4337242 | 40704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.