Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone ybbn | FD722_19355 | Not Available | - | 4314141 - 4314995 | 31880.2 |
| sdr family nad(p)-dependent oxidoreductase | FD722_19360 | Not Available | - | 4315269 - 4316093 | 30919.3 |
| tigr01777 family protein | FD722_19365 | Not Available | - | 4316110 - 4317018 | 33634.6 |
| Trna-tyr | Not Available | Not Available | + | 4317468 - 4317552 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 4317649 - 4317733 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | FD722_19385 | Not Available | + | 4318170 - 4319279 | 39681.6 |
| efflux rnd transporter permease subunit | FD722_19390 | Not Available | + | 4319279 - 4322401 | 113533.0 |
| pts fructose transporter subunit iib | FD722_19395 | Not Available | + | 4322558 - 4322866 | 10946.4 |
| hypothetical protein | FD722_19400 | Not Available | + | 4322887 - 4323693 | 30338.7 |
| helix-turn-helix transcriptional regulator | FD722_19405 | Not Available | + | 4323690 - 4324562 | 33846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.