Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | FD722_01625 | Not Available | - | 331409 - 335344 | 143211.0 |
| membrane-bound lytic murein transglycosylase mltc | FD722_01630 | Not Available | - | 335619 - 336746 | 42720.7 |
| duf3943 domain-containing protein | FD722_01635 | Not Available | - | 336866 - 338197 | 50353.4 |
| terc family protein | FD722_01640 | Not Available | + | 338482 - 339246 | 28072.7 |
| c-type cytochrome | FD722_01645 | Not Available | + | 339618 - 341015 | 51793.3 |
| hypothetical protein | FD722_01650 | Not Available | - | 341080 - 341304 | 8130.65 |
| hypothetical protein | FD722_01655 | Not Available | - | 341554 - 342318 | 26629.7 |
| hypothetical protein | FD722_01660 | Not Available | - | 342466 - 342978 | 18603.9 |
| clp protease clpe | FD722_01665 | Not Available | - | 343038 - 343715 | 25396.7 |
| outer membrane usher protein pefc | FD722_01670 | Not Available | - | 343747 - 346107 | 85516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.