Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | + | 4226980 - 4227064 | Not Available |
| Trna-ser | Not Available | Not Available | + | 4227108 - 4227196 | Not Available |
| eal domain-containing protein | FD722_18935 | Not Available | + | 4227254 - 4229662 | 91811.6 |
| duf2007 domain-containing protein | FD722_18940 | Not Available | - | 4229629 - 4229868 | 8640.15 |
| hypothetical protein | FD722_18945 | Not Available | + | 4230139 - 4230492 | 13751.2 |
| sodium/glutamate symporter | FD722_18950 | Not Available | + | 4231392 - 4232624 | 43955.8 |
| ofa family mfs transporter | FD722_18955 | Not Available | + | 4232874 - 4234103 | 43217.0 |
| amino acid abc transporter substrate-binding protein | FD722_18960 | Not Available | + | 4234257 - 4235285 | 38326.9 |
| bax inhibitor-1/ycca family protein | FD722_18965 | Not Available | + | 4235493 - 4236155 | 23562.4 |
| sulfurtransferase tuse | FD722_18970 | Not Available | + | 4236289 - 4236618 | 12493.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.