Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | FD722_01575 | Not Available | + | 317457 - 318095 | 24521.9 |
| helix-turn-helix transcriptional regulator | FD722_01580 | Not Available | - | 318117 - 318800 | 25902.2 |
| helix-turn-helix transcriptional regulator | FD722_01585 | Not Available | + | 319788 - 320555 | 28629.2 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | FD722_01590 | Not Available | + | 320845 - 323988 | 116427.0 |
| hypothetical protein | FD722_01595 | Not Available | + | 323988 - 324653 | 24699.1 |
| sodium/proline symporter putp | FD722_01600 | Not Available | + | 324822 - 326318 | 53210.6 |
| hlyc/corc family transporter | FD722_01605 | Not Available | - | 326380 - 327705 | 48759.9 |
| succinylglutamate desuccinylase/aspartoacylase family protein | FD722_01610 | Not Available | - | 327836 - 328894 | 38254.8 |
| peptidase m23 | FD722_01615 | Not Available | - | 329237 - 330577 | 49877.7 |
| riboflavin-specific deaminase | FD722_01620 | Not Available | + | 330844 - 331281 | 15384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.