Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FD722_18570 | Not Available | - | 4154900 - 4155769 | 31653.8 |
| outer membrane lipoprotein lolb | FD722_18575 | Not Available | - | 4155784 - 4156437 | 24593.5 |
| glutamyl-trna reductase | FD722_18580 | Not Available | + | 4156698 - 4157951 | 45739.8 |
| peptide chain release factor 1 | FD722_18585 | Not Available | + | 4158121 - 4159209 | 40602.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | FD722_18590 | Not Available | + | 4159211 - 4160059 | 30924.8 |
| invasion protein | FD722_18595 | Not Available | + | 4160072 - 4160452 | 13822.7 |
| tetratricopeptide repeat protein | FD722_18600 | Not Available | + | 4160494 - 4161303 | 31234.2 |
| 3-deoxy-8-phosphooctulonate synthase | FD722_18605 | Not Available | + | 4161318 - 4162172 | 31265.7 |
| haaap family serine/threonine permease | FD722_18610 | Not Available | + | 4162464 - 4163723 | 46058.5 |
| methyl-accepting chemotaxis protein | FD722_18615 | Not Available | - | 4163824 - 4165707 | 68018.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.