Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase | FD722_18525 | Not Available | - | 4143285 - 4144469 | 43057.7 |
| nucleotide sugar dehydrogenase | FD722_18530 | Not Available | - | 4144472 - 4145638 | 43021.4 |
| beta-ketoacyl-acp synthase i | FD722_18535 | Not Available | - | 4146069 - 4147283 | 42839.1 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FD722_18540 | Not Available | + | 4147509 - 4149710 | 81577.1 |
| hypothetical protein | FD722_18545 | Not Available | - | 4149836 - 4151044 | 46180.2 |
| Trna-leu | Not Available | Not Available | + | 4151328 - 4151409 | Not Available |
| Trna-met | Not Available | Not Available | + | 4151451 - 4151527 | Not Available |
| redox-regulated atpase ychf | FD722_18555 | Not Available | - | 4151860 - 4152951 | 39702.7 |
| aminoacyl-trna hydrolase | FD722_18560 | Not Available | - | 4153013 - 4153603 | 21435.9 |
| ribose-phosphate pyrophosphokinase | FD722_18565 | Not Available | - | 4153920 - 4154867 | 34340.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.