Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory sulfurtransferase fdhd | FD722_18320 | Not Available | - | 4098115 - 4098963 | 31225.8 |
| formate dehydrogenase-n subunit alpha | FD722_18325 | Not Available | + | 4099068 - 4102082 | 111561.0 |
| formate dehydrogenase subunit beta | FD722_18330 | Not Available | + | 4102086 - 4102976 | 32733.0 |
| formate dehydrogenase subunit gamma | FD722_18335 | Not Available | + | 4102973 - 4103605 | 23910.7 |
| formate dehydrogenase accessory protein fdhe | FD722_18340 | Not Available | + | 4103768 - 4104658 | 33502.4 |
| l-seryl-trna(sec) selenium transferase | FD722_18345 | Not Available | + | 4104735 - 4106186 | 53176.2 |
| selenocysteine-specific translation elongation factor | FD722_18350 | Not Available | + | 4106183 - 4108102 | 72394.8 |
| Trna-sec(p) | Not Available | Not Available | + | 4108170 - 4108260 | Not Available |
| sugar-binding transcriptional regulator | FD722_18360 | Not Available | - | 4108368 - 4109342 | 35540.6 |
| Trna-asp | Not Available | Not Available | + | 4109979 - 4110055 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.