Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | FD722_18270 | Not Available | + | 4089201 - 4090115 | 34587.8 |
| hypothetical protein | FD722_18275 | Not Available | - | 4090167 - 4090484 | 12395.7 |
| sdr family oxidoreductase | FD722_18280 | Not Available | - | 4090603 - 4091400 | 28196.7 |
| metal ion permease | FD722_18285 | Not Available | - | 4091445 - 4092896 | 53365.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | FD722_18290 | Not Available | + | 4093128 - 4093604 | 17397.0 |
| dna-3-methyladenine glycosylase i | FD722_18295 | Not Available | - | 4093601 - 4094191 | 22669.3 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FD722_18300 | Not Available | + | 4094396 - 4095040 | 22659.8 |
| u32 family peptidase | FD722_18305 | Not Available | + | 4095212 - 4096588 | 51896.8 |
| yfhl family 4fe-4s dicluster ferredoxin | FD722_18310 | Not Available | + | 4096594 - 4096848 | 9411.24 |
| penicillin-insensitive murein endopeptidase | FD722_18315 | Not Available | - | 4096943 - 4097746 | 29711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.