Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | FD722_18215 | Not Available | + | 4076467 - 4077951 | 54817.7 |
| sensor domain-containing diguanylate cyclase | FD722_18220 | Not Available | - | 4078031 - 4079629 | 61133.5 |
| glycosyl hydrolase family protein | FD722_18225 | Not Available | + | 4079877 - 4081280 | 53436.4 |
| dash family cryptochrome | FD722_18230 | Not Available | - | 4081365 - 4082675 | 51584.9 |
| hypothetical protein | FD722_18235 | Not Available | - | 4082746 - 4083075 | 12737.5 |
| hypothetical protein | FD722_18240 | Not Available | - | 4083105 - 4083422 | 12657.5 |
| mbl fold metallo-hydrolase | FD722_18245 | Not Available | + | 4083708 - 4085687 | 73275.6 |
| lysr family transcriptional regulator | FD722_18250 | Not Available | - | 4085835 - 4086740 | 34938.0 |
| type ii toxin-antitoxin system rele/pare family toxin | FD722_18260 | Not Available | - | 4088342 - 4088686 | 13694.7 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | FD722_18265 | Not Available | - | 4088696 - 4088935 | 9047.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.