Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| globin | FD722_18065 | Not Available | - | 4046817 - 4047269 | 17130.4 |
| trimethylamine-n-oxide reductase tora | FD722_18070 | Not Available | - | 4047359 - 4049839 | 93619.3 |
| pentaheme c-type cytochrome torc | FD722_18075 | Not Available | - | 4049857 - 4051038 | 44292.3 |
| nape protein | FD722_18080 | Not Available | - | 4051091 - 4051261 | 6322.69 |
| 50s ribosomal protein l20 | FD722_18085 | Not Available | - | 4052060 - 4052413 | 13476.6 |
| 50s ribosomal protein l35 | FD722_18090 | Not Available | - | 4052456 - 4052650 | 7296.28 |
| translation initiation factor if-3 | FD722_18095 | Not Available | - | 4052751 - 4053302 | 20627.1 |
| threonine--trna ligase | FD722_18100 | Not Available | - | 4053306 - 4055237 | 73666.1 |
| fructosamine kinase family protein | FD722_18105 | Not Available | + | 4055762 - 4056628 | 33405.5 |
| hexitol phosphatase hxpb | FD722_18110 | Not Available | + | 4056764 - 4057417 | 23684.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.