Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter | FD722_17795 | Not Available | - | 3994438 - 3995529 | 40463.4 |
| amino acid abc transporter permease | FD722_17800 | Not Available | - | 3995764 - 3996723 | 35761.9 |
| transporter substrate-binding domain-containing protein | FD722_17805 | Not Available | - | 3996726 - 3997541 | 30520.4 |
| amino acid abc transporter permease | FD722_17810 | Not Available | - | 3997666 - 3998508 | 31203.6 |
| amino acid abc transporter atp-binding protein | FD722_17815 | Not Available | - | 3998519 - 3999259 | 27532.4 |
| 3-deoxy-7-phosphoheptulonate synthase arog | FD722_17820 | Not Available | + | 3999693 - 4000748 | 38676.3 |
| hypothetical protein | FD722_17825 | Not Available | + | 4001256 - 4001747 | 17898.8 |
| rhomboid family intramembrane serine protease | FD722_17830 | Not Available | + | 4001740 - 4002303 | 20984.1 |
| duf1840 domain-containing protein | FD722_17835 | Not Available | + | 4002315 - 4002635 | 11780.2 |
| duf2986 domain-containing protein | FD722_17840 | Not Available | + | 4002722 - 4002901 | 6770.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.