Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | FD722_17745 | Not Available | - | 3981992 - 3982351 | 13676.3 |
| outer membrane protein assembly factor bamd | FD722_17750 | Not Available | - | 3982755 - 3983483 | 27965.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FD722_17755 | Not Available | + | 3983652 - 3984626 | 36698.4 |
| peptidoglycan editing factor pgef | FD722_17760 | Not Available | + | 3984629 - 3985360 | 26549.5 |
| atp-dependent chaperone clpb | FD722_17765 | Not Available | + | 3985528 - 3988101 | 95689.0 |
| nucleotidyltransferase family protein | FD722_17770 | Not Available | - | 3988802 - 3989902 | 42598.1 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | FD722_17775 | Not Available | + | 3990115 - 3990651 | 19462.6 |
| histidine phosphatase family protein | FD722_17780 | Not Available | + | 3990714 - 3991346 | 24544.2 |
| dead/deah box helicase | FD722_17785 | Not Available | - | 3991476 - 3992705 | 45444.1 |
| cobyric acid synthase | FD722_17790 | Not Available | + | 3992845 - 3994323 | 53442.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.