Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iib | FD722_01475 | Not Available | - | 289393 - 289866 | 17590.4 |
| deor/glpr transcriptional regulator | FD722_01480 | Not Available | - | 289938 - 290714 | 28616.2 |
| duf535 domain-containing protein | FD722_01485 | Not Available | + | 291119 - 292054 | 36445.1 |
| hypothetical protein | FD722_01490 | Not Available | - | 292257 - 292439 | 6833.26 |
| choloylglycine hydrolase family protein | FD722_01495 | Not Available | - | 292927 - 294018 | 39997.3 |
| ncs2 family permease | FD722_01500 | Not Available | - | 294183 - 295544 | 46560.4 |
| serine dehydratase subunit alpha family protein | FD722_01505 | Not Available | + | 296005 - 297309 | 45128.6 |
| hypothetical protein | FD722_01510 | Not Available | + | 297950 - 299209 | 46180.0 |
| lysr family transcriptional regulator | FD722_01515 | Not Available | - | 299289 - 300197 | 34268.5 |
| dmt family transporter | FD722_01520 | Not Available | - | 300374 - 301264 | 32400.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.