Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | FD722_17645 | Not Available | + | 3960743 - 3961189 | 16285.1 |
| insulinase family protein | FD722_17650 | Not Available | + | 3961202 - 3964048 | 105258.0 |
| glutamate--cysteine ligase | FD722_17655 | Not Available | + | 3964203 - 3965768 | 59227.9 |
| hypothetical protein | FD722_17660 | Not Available | + | 3965892 - 3966503 | 23824.2 |
| s-ribosylhomocysteine lyase | FD722_17665 | Not Available | + | 3966542 - 3967057 | 18909.7 |
| duf21 domain-containing protein | FD722_17670 | Not Available | - | 3967163 - 3968440 | 47345.2 |
| inner membrane protein ypjd | FD722_17675 | Not Available | - | 3968483 - 3969280 | 29117.2 |
| signal recognition particle protein | FD722_17680 | Not Available | + | 3969482 - 3970849 | 50102.5 |
| 30s ribosomal protein s16 | FD722_17685 | Not Available | + | 3971021 - 3971272 | 9163.15 |
| ribosome maturation factor rimm | FD722_17690 | Not Available | + | 3971299 - 3971832 | 20059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.