Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | FD722_17445 | Not Available | + | 3917416 - 3919311 | 70846.2 |
| formate c-acetyltransferase | FD722_17450 | Not Available | - | 3919602 - 3921875 | 84283.2 |
| formate transporter foca | FD722_17455 | Not Available | - | 3921932 - 3922804 | 31591.2 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | FD722_17460 | Not Available | - | 3923464 - 3925212 | 65930.4 |
| exodeoxyribonuclease iii | FD722_17465 | Not Available | - | 3925433 - 3926239 | 30933.8 |
| glsb/yeaq/ymge family stress response membrane protein | FD722_17470 | Not Available | + | 3926703 - 3926951 | 8409.6 |
| response regulator | FD722_17475 | Not Available | - | 3927115 - 3928767 | 63086.2 |
| Trna-tyr | Not Available | Not Available | + | 3928915 - 3928999 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 3929096 - 3929180 | Not Available |
| utp--glucose-1-phosphate uridylyltransferase galu | FD722_17490 | Not Available | - | 3929495 - 3930385 | 32357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.