Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoate--protein ligase | FD722_17330 | Not Available | - | 3886597 - 3887613 | 38509.5 |
| type i secretion system permease/atpase | FD722_17335 | Not Available | - | 3888138 - 3890258 | 78243.9 |
| eal domain-containing protein | FD722_17340 | Not Available | - | 3890261 - 3892189 | 72438.6 |
| sulfate adenylyltransferase | FD722_17345 | Not Available | - | 3892195 - 3892866 | 25640.1 |
| ompa family protein | FD722_17350 | Not Available | - | 3892872 - 3893462 | 21313.0 |
| tolc family outer membrane protein | FD722_17355 | Not Available | - | 3893476 - 3894786 | 49000.7 |
| hlyd family type i secretion periplasmic adaptor subunit | FD722_17360 | Not Available | - | 3894789 - 3896183 | 51564.1 |
| phosphate acetyltransferase | FD722_17380 | Not Available | - | 3899278 - 3901425 | 76891.2 |
| acetate kinase | FD722_17385 | Not Available | - | 3901587 - 3902783 | 42852.4 |
| duf412 domain-containing protein | FD722_17390 | Not Available | + | 3903123 - 3903572 | 17466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.