Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | FD722_16930 | Not Available | + | 3815379 - 3815795 | 15440.9 |
| slc13 family permease | FD722_16935 | Not Available | + | 3816129 - 3817544 | 50952.8 |
| ghkl domain-containing protein | FD722_16940 | Not Available | + | 3817563 - 3818891 | 48905.7 |
| response regulator | FD722_16945 | Not Available | + | 3818901 - 3819374 | 17950.3 |
| zinc/cadmium/mercury/lead-transporting atpase | FD722_16950 | Not Available | + | 3819544 - 3822006 | 86998.0 |
| hcp family type vi secretion system effector | FD722_16955 | Not Available | + | 3822333 - 3822851 | 19091.6 |
| type vi secretion system tip protein vgrg | FD722_16960 | Not Available | + | 3822935 - 3824896 | 73168.9 |
| duf4123 domain-containing protein | FD722_16965 | Not Available | + | 3824835 - 3825623 | 30290.7 |
| hypothetical protein | FD722_16970 | Not Available | + | 3825634 - 3827172 | 57548.1 |
| hypothetical protein | FD722_16975 | Not Available | + | 3827174 - 3828061 | 33231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.