Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | FD722_16880 | Not Available | + | 3804753 - 3805181 | 15391.9 |
| duf937 domain-containing protein | FD722_16885 | Not Available | + | 3805228 - 3805680 | 15193.8 |
| lysine exporter lyso family protein | FD722_16890 | Not Available | - | 3805788 - 3806687 | 32473.8 |
| hdod domain-containing protein | FD722_16895 | Not Available | - | 3806994 - 3807908 | 34763.1 |
| tfox/sxy family dna transformation protein | FD722_16900 | Not Available | + | 3808458 - 3809048 | 22381.2 |
| dna-binding transcriptional regulator dsdc | FD722_16905 | Not Available | + | 3809152 - 3810084 | 35203.2 |
| 2-hydroxyacid dehydrogenase | FD722_16910 | Not Available | - | 3810107 - 3811102 | 37230.7 |
| response regulator | FD722_16915 | Not Available | - | 3811263 - 3811763 | 18665.2 |
| cyclic nucleotide-binding domain-containing protein | FD722_16920 | Not Available | - | 3811760 - 3813709 | 73499.0 |
| duf945 domain-containing protein | FD722_16925 | Not Available | + | 3813887 - 3815200 | 47976.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.