Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein | FD722_16825 | Not Available | + | 3794968 - 3795516 | 20821.9 |
| l-ascorbate 6-phosphate lactonase | FD722_16830 | Not Available | - | 3795734 - 3796801 | 40426.2 |
| hth-type transcriptional regulator ular | FD722_16835 | Not Available | - | 3796921 - 3797676 | 27776.6 |
| pts ascorbate-specific subunit iibc | FD722_16840 | Not Available | + | 3798011 - 3799813 | 65583.1 |
| pts ascorbate-specific transporter subunit iia | FD722_16845 | Not Available | + | 3799885 - 3800352 | 17022.1 |
| l-ribulose-5-phosphate 4-epimerase | FD722_16850 | Not Available | + | 3800362 - 3801060 | 25585.2 |
| cof-type had-iib family hydrolase | FD722_16855 | Not Available | + | 3801083 - 3801904 | 31483.4 |
| 3-dehydro-l-gulonate-6-phosphate decarboxylase | FD722_16860 | Not Available | + | 3801909 - 3802556 | 23533.4 |
| l-ribulose-5-phosphate 3-epimerase | FD722_16865 | Not Available | + | 3802566 - 3803447 | 34080.8 |
| hypothetical protein | FD722_16870 | Not Available | - | 3803594 - 3803803 | 7619.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.