Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | FD722_16305 | Not Available | + | 3672065 - 3672475 | 16323.8 |
| sodium:alanine symporter family protein | FD722_16310 | Not Available | - | 3672551 - 3673957 | 49740.7 |
| glycoside hydrolase family 18 protein | FD722_16315 | Not Available | - | 3674463 - 3675773 | 48867.1 |
| arac family transcriptional regulator | FD722_16320 | Not Available | + | 3676226 - 3676930 | 26691.1 |
| efflux rnd transporter permease subunit | FD722_16325 | Not Available | - | 3676922 - 3680017 | 113005.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD722_16330 | Not Available | - | 3680010 - 3681101 | 40395.7 |
| tetr/acrr family transcriptional regulator | FD722_16335 | Not Available | + | 3681266 - 3681895 | 23809.8 |
| hypothetical protein | FD722_16340 | Not Available | + | 3682201 - 3682596 | 14927.9 |
| duf4092 domain-containing protein | FD722_16345 | Not Available | + | 3682824 - 3687320 | 167403.0 |
| mfs transporter tsga | FD722_16350 | Not Available | - | 3687404 - 3688591 | 43683.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.