Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hyaluronate lyase | FD722_01215 | Not Available | - | 239803 - 242223 | 90942.7 |
| nicotinamide riboside transporter pnuc | FD722_01230 | Not Available | + | 243053 - 243784 | 27239.5 |
| nucleoside phosphorylase | FD722_01235 | Not Available | + | 243781 - 244518 | 27121.5 |
| crp/fnr family transcriptional regulator | FD722_01240 | Not Available | + | 244645 - 245328 | 26425.8 |
| endoxylanase | FD722_01245 | Not Available | - | 245386 - 246105 | 27236.3 |
| glycoside hydrolase family 105 protein | FD722_01250 | Not Available | - | 246174 - 247217 | 39444.5 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | FD722_01255 | Not Available | - | 247235 - 247993 | 26898.2 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | FD722_01260 | Not Available | - | 248094 - 248924 | 31052.0 |
| n-acetylglucosamine-6-phosphate deacetylase | FD722_01265 | Not Available | - | 248957 - 250111 | 41558.6 |
| pts sugar transporter subunit iia | FD722_01270 | Not Available | - | 250113 - 250556 | 15653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.