Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | FD722_01165 | Not Available | - | 225814 - 227349 | 56235.2 |
| dj-1/pfpi family protein | FD722_01170 | Not Available | - | 227583 - 228161 | 21559.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FD722_01175 | Not Available | - | 228171 - 228806 | 22686.6 |
| sugar kinase | FD722_01180 | Not Available | - | 228796 - 229770 | 36170.3 |
| tagatose bisphosphate family class ii aldolase | FD722_01185 | Not Available | - | 229916 - 230770 | 31329.6 |
| duf2264 domain-containing protein | FD722_01190 | Not Available | - | 231051 - 232589 | 58840.5 |
| arylsulfatase | FD722_01195 | Not Available | - | 232778 - 234409 | 59895.9 |
| anaerobic sulfatase maturase | FD722_01200 | Not Available | - | 234481 - 235734 | 47134.9 |
| chondroitinase | FD722_01205 | Not Available | + | 235994 - 239074 | 114549.0 |
| hypothetical protein | FD722_01210 | Not Available | + | 239209 - 239763 | 19956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.