Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar-phosphatase | FD722_01115 | Not Available | + | 214776 - 215588 | 29700.2 |
| hypothetical protein | FD722_01120 | Not Available | - | 215687 - 215920 | 9436.12 |
| nird/ygiw/ydei family stress tolerance protein | FD722_01125 | Not Available | - | 215925 - 216296 | 13067.5 |
| tetr/acrr family transcriptional regulator | FD722_01130 | Not Available | - | 216539 - 217138 | 22850.7 |
| efflux rnd transporter periplasmic adaptor subunit | FD722_01135 | Not Available | + | 217350 - 218456 | 40067.4 |
| efflux rnd transporter permease subunit | FD722_01140 | Not Available | + | 218460 - 221510 | 111349.0 |
| duf535 domain-containing protein | FD722_01145 | Not Available | - | 221577 - 222452 | 34263.4 |
| arginase | FD722_01150 | Not Available | - | 222803 - 223774 | 36002.3 |
| iclr family transcriptional regulator | FD722_01155 | Not Available | - | 223820 - 224554 | 26846.5 |
| yebc/pmpr family dna-binding transcriptional regulator | FD722_01160 | Not Available | + | 224939 - 225661 | 26673.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.