Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | FD722_00910 | Not Available | - | 167018 - 169843 | 103929.0 |
| carbohydrate abc transporter substrate-binding protein | FD722_00915 | Not Available | - | 170182 - 171435 | 45973.1 |
| hamp domain-containing protein | FD722_00920 | Not Available | - | 171447 - 172892 | 54842.9 |
| pts glucose transporter subunit iib | FD722_00925 | Not Available | + | 173140 - 173454 | 11633.5 |
| response regulator transcription factor | FD722_00930 | Not Available | - | 173517 - 174242 | 27185.7 |
| duf3157 family protein | FD722_00935 | Not Available | - | 174359 - 174949 | 21525.1 |
| diguanylate cyclase | FD722_00940 | Not Available | + | 175152 - 176288 | 43817.1 |
| copper resistance protein nlpe | FD722_00945 | Not Available | - | 176350 - 176775 | 15196.8 |
| hypothetical protein | FD722_00950 | Not Available | - | 176952 - 177257 | 11356.6 |
| lysr family transcriptional regulator | FD722_00960 | Not Available | - | 178233 - 179171 | 35171.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.