Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system lipoprotein trav | FD722_00400 | Not Available | - | 70136 - 70684 | 19643.6 |
| conjugal transfer protein trab | FD722_00405 | Not Available | - | 70684 - 72033 | 49017.8 |
| conjugal transfer protein trak | FD722_00410 | Not Available | - | 72037 - 72987 | 34201.3 |
| pilus assembly protein | FD722_00415 | Not Available | - | 72977 - 73606 | 24487.3 |
| type iv conjugative transfer system protein tral | FD722_00420 | Not Available | - | 73603 - 73884 | 10818.8 |
| hypothetical protein | FD722_00425 | Not Available | - | 74354 - 74755 | 14829.7 |
| duf4400 domain-containing protein | FD722_00430 | Not Available | - | 74772 - 75401 | 24150.8 |
| hypothetical protein | FD722_00435 | Not Available | - | 75358 - 75942 | 22290.7 |
| conjugative transfer system coupling protein trad | FD722_00440 | Not Available | - | 75952 - 77820 | 69498.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 80004 - 80433 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.