Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | FD722_00355 | Not Available | - | 57561 - 58265 | 26188.6 |
| conjugal transfer protein traw | FD722_00360 | Not Available | - | 58262 - 59518 | 46851.5 |
| s26 family signal peptidase | FD722_00365 | Not Available | - | 59493 - 60008 | 19452.6 |
| hypothetical protein | FD722_00370 | Not Available | - | 60005 - 60325 | 11282.7 |
| type iv secretion system protein trac | FD722_00375 | Not Available | - | 60343 - 62793 | 92552.0 |
| dsbc family protein | FD722_00380 | Not Available | - | 62790 - 63494 | 25909.5 |
| duf4165 domain-containing protein | FD722_00385 | Not Available | - | 63650 - 69070 | 199708.0 |
| trbc/virb2 family protein | FD722_00390 | Not Available | - | 69278 - 69652 | 12851.8 |
| trbc/virb2 family protein | FD722_00395 | Not Available | - | 69747 - 70121 | 12865.7 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 70174 - 70270 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.