Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 4692150 - 4692226 | Not Available |
| cytochrome c5 family protein | FD720_20905 | Not Available | + | 4692505 - 4692915 | 14520.4 |
| dna helicase rep | FD720_20910 | Not Available | - | 4692992 - 4695010 | 77511.4 |
| tetr/acrr family transcriptional regulator | FD720_20915 | Not Available | + | 4695200 - 4695766 | 21505.1 |
| efflux rnd transporter periplasmic adaptor subunit | FD720_20920 | Not Available | + | 4695790 - 4696896 | 40674.0 |
| multidrug efflux rnd transporter permease subunit | FD720_20925 | Not Available | + | 4696909 - 4700025 | 112284.0 |
| accessory factor ubik family protein | FD720_20930 | Not Available | + | 4700159 - 4700419 | 9943.0 |
| ketol-acid reductoisomerase | FD720_20935 | Not Available | - | 4700497 - 4701984 | 55077.8 |
| hth-type transcriptional activator ilvy | FD720_20940 | Not Available | + | 4702112 - 4702990 | 32579.4 |
| hypothetical protein | FD720_20945 | Not Available | - | 4703303 - 4703872 | 20664.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.