Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf423 domain-containing protein | FD720_03405 | Not Available | + | 725137 - 725541 | 14299.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | FD720_03410 | Not Available | + | 725551 - 726639 | 41522.2 |
| flap endonuclease xni | FD720_03415 | Not Available | - | 726696 - 727472 | 28600.2 |
| log family protein | FD720_03420 | Not Available | - | 727544 - 728920 | 51244.7 |
| diguanylate cyclase | FD720_03425 | Not Available | - | 729112 - 730662 | 59750.6 |
| ggdef domain-containing protein | FD720_03430 | Not Available | - | 730812 - 733088 | 87610.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | FD720_03435 | Not Available | - | 733207 - 734055 | 32493.1 |
| secy-interacting protein | FD720_03440 | Not Available | + | 734188 - 734742 | 20694.8 |
| hypothetical protein | FD720_03445 | Not Available | + | 734745 - 735518 | 29083.7 |
| hypothetical protein | FD720_03450 | Not Available | - | 735547 - 735813 | 9926.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.