Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaminase a | FD720_03305 | Not Available | - | 697925 - 698884 | 34482.0 |
| amino acid permease | FD720_03310 | Not Available | - | 698895 - 700421 | 55234.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | FD720_03315 | Not Available | - | 700968 - 701999 | 36040.5 |
| multidrug dmt transporter permease | FD720_03320 | Not Available | - | 702335 - 702637 | 11162.3 |
| dna-3-methyladenine glycosylase i | FD720_03325 | Not Available | + | 702719 - 703408 | 26119.6 |
| lysr family transcriptional regulator | FD720_03330 | Not Available | - | 703405 - 704292 | 33995.8 |
| tdt family transporter | FD720_03335 | Not Available | + | 704446 - 705432 | 35672.1 |
| exodeoxyribonuclease v subunit gamma | FD720_03340 | Not Available | + | 705634 - 709089 | 131494.0 |
| exodeoxyribonuclease v subunit beta | FD720_03345 | Not Available | + | 709383 - 713048 | 137662.0 |
| exodeoxyribonuclease v subunit alpha | FD720_03350 | Not Available | + | 713041 - 715164 | 77899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.