Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| afg1 family atpase | FD720_03100 | Not Available | + | 655088 - 656191 | 42850.7 |
| 50s ribosomal protein l13 | FD720_03105 | Not Available | + | 656460 - 656888 | 15853.5 |
| 30s ribosomal protein s9 | FD720_03110 | Not Available | + | 656904 - 657296 | 14798.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | FD720_03115 | Not Available | + | 657711 - 658304 | 21110.2 |
| cytochrome bc complex cytochrome b subunit | FD720_03120 | Not Available | + | 658304 - 659569 | 48140.6 |
| cytochrome c1 | FD720_03125 | Not Available | + | 659566 - 660303 | 27923.5 |
| stringent starvation protein a | FD720_03130 | Not Available | + | 660389 - 661027 | 24348.3 |
| clpxp protease specificity-enhancing factor | FD720_03135 | Not Available | + | 661029 - 661532 | 18197.5 |
| bon domain-containing protein | FD720_03140 | Not Available | - | 661585 - 662121 | 19549.6 |
| phosphoheptose isomerase | FD720_03145 | Not Available | - | 662125 - 662715 | 20910.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.