Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | FD720_02850 | Not Available | + | 603673 - 604221 | 20102.5 |
| rnase e specificity factor csrd | FD720_02855 | Not Available | + | 604372 - 606312 | 73237.8 |
| msha biogenesis protein mshi | FD720_02860 | Not Available | + | 606477 - 607928 | 54257.4 |
| msha biogenesis protein mshj | FD720_02865 | Not Available | + | 607925 - 608560 | 23914.1 |
| msha biogenesis protein mshk | FD720_02870 | Not Available | + | 608589 - 608876 | 10382.4 |
| pilus (msha type) biogenesis protein mshl | FD720_02875 | Not Available | + | 608890 - 610584 | 60542.5 |
| msha biogenesis protein mshm | FD720_02880 | Not Available | + | 610588 - 611436 | 31756.9 |
| tetratricopeptide repeat protein | FD720_02885 | Not Available | + | 611433 - 612599 | 42360.6 |
| type ii/iv secretion system protein | FD720_02890 | Not Available | + | 612604 - 614319 | 63672.1 |
| type ii secretion system f family protein | FD720_02895 | Not Available | + | 614329 - 615546 | 44807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.