Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | FD720_02795 | Not Available | - | 585927 - 585987 | 2118.73 |
| dihydrofolate reductase | FD720_02800 | Not Available | - | 586115 - 586648 | 20306.2 |
| is91 family transposase | FD720_02805 | Not Available | - | 587004 - 588545 | 58501.3 |
| homoserine o-succinyltransferase | FD720_02815 | Not Available | + | 589301 - 590242 | 36336.2 |
| sodium:proton antiporter | FD720_02820 | Not Available | - | 590372 - 591652 | 46540.9 |
| methionine synthase | FD720_02825 | Not Available | + | 591849 - 595514 | 135184.0 |
| lysine-sensitive aspartokinase 3 | FD720_02830 | Not Available | - | 595574 - 596953 | 49467.6 |
| alanine--glyoxylate aminotransferase family protein | FD720_02835 | Not Available | + | 597505 - 598623 | 40576.0 |
| ligase | FD720_02840 | Not Available | - | 598677 - 600428 | 66718.2 |
| excinuclease abc subunit uvra | FD720_02845 | Not Available | - | 600581 - 603406 | 104082.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.