Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | FD720_02580 | Not Available | - | 544630 - 544959 | 11676.8 |
| sodium:proton antiporter | FD720_02585 | Not Available | - | 545150 - 546940 | 65505.1 |
| lysr family transcriptional regulator | FD720_02590 | Not Available | + | 547167 - 548105 | 35129.1 |
| mate family efflux transporter | FD720_02595 | Not Available | - | 548132 - 549505 | 50047.5 |
| lysr family transcriptional regulator | FD720_02600 | Not Available | + | 549609 - 550487 | 33219.9 |
| alkaline phosphatase family protein | FD720_02605 | Not Available | + | 550532 - 552469 | 74337.2 |
| hypothetical protein | FD720_02610 | Not Available | + | 552627 - 552932 | 11367.6 |
| copper resistance protein nlpe | FD720_02615 | Not Available | + | 553071 - 553496 | 15389.1 |
| atp-binding cassette domain-containing protein | FD720_02620 | Not Available | + | 553748 - 554407 | 24417.4 |
| abc transporter permease | FD720_02625 | Not Available | + | 554404 - 555171 | 27681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.