Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3283 family protein | FD720_02530 | Not Available | + | 536350 - 536556 | 7771.17 |
| tonb-dependent receptor | FD720_02535 | Not Available | + | 536772 - 537638 | 31895.4 |
| hypothetical protein | FD720_02540 | Not Available | + | 537651 - 538778 | 43032.2 |
| duf4056 domain-containing protein | FD720_02545 | Not Available | + | 538790 - 539869 | 39767.6 |
| glycosyltransferase family 4 protein | FD720_02550 | Not Available | + | 539986 - 541032 | 39942.9 |
| acyltransferase | FD720_02555 | Not Available | + | 541062 - 541745 | 25342.1 |
| glycosyltransferase family 4 protein | FD720_02560 | Not Available | + | 541763 - 543031 | 49006.2 |
| phytanoyl-coa dioxygenase family protein | FD720_02565 | Not Available | + | 542997 - 543884 | 34201.2 |
| copper chaperone pcu(a)c | FD720_02570 | Not Available | - | 543877 - 544287 | 15496.7 |
| hypothetical protein | FD720_02575 | Not Available | - | 544354 - 544590 | 9382.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.