Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | FD720_02480 | Not Available | - | 523020 - 523928 | 33291.2 |
| duf1656 domain-containing protein | FD720_02485 | Not Available | - | 523947 - 524162 | 7981.05 |
| lysr family transcriptional regulator | FD720_02490 | Not Available | + | 524328 - 525215 | 33371.6 |
| duf808 domain-containing protein | FD720_02495 | Not Available | + | 525526 - 526422 | 31547.5 |
| amidohydrolase | FD720_02500 | Not Available | - | 526486 - 528459 | 72921.3 |
| transketolase | FD720_02505 | Not Available | - | 528970 - 530964 | 72096.0 |
| transaldolase | FD720_02510 | Not Available | - | 531063 - 532013 | 34810.6 |
| is1 family transposase | FD720_02515 | Not Available | - | 532514 - 534007 | 56958.1 |
| purine-nucleoside phosphorylase | FD720_02520 | Not Available | - | 534250 - 534960 | 25792.1 |
| hypothetical protein | FD720_02525 | Not Available | + | 535533 - 536288 | 29294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.