Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar-phosphatase | FD720_02430 | Not Available | - | 509487 - 510299 | 29695.2 |
| abc transporter substrate-binding protein | FD720_02435 | Not Available | + | 510654 - 511655 | 36621.5 |
| proline/glycine betaine abc transporter permease | FD720_02440 | Not Available | + | 511813 - 512706 | 32487.8 |
| glycine betaine/l-proline abc transporter atp-binding protein | FD720_02445 | Not Available | + | 512706 - 513983 | 47250.5 |
| lysr family transcriptional regulator | FD720_02450 | Not Available | - | 514049 - 514963 | 33914.0 |
| adenylosuccinate synthetase | FD720_02455 | Not Available | + | 515120 - 516376 | 45700.6 |
| isoaspartyl peptidase/l-asparaginase | FD720_02460 | Not Available | - | 516473 - 517498 | 36219.2 |
| nucleoside hydrolase | FD720_02465 | Not Available | + | 517801 - 518778 | 36018.0 |
| cryptochrome/photolyase family protein | FD720_02470 | Not Available | - | 518888 - 520435 | 60872.3 |
| duf2955 domain-containing protein | FD720_02475 | Not Available | - | 520834 - 523023 | 83364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.