Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | FD720_02380 | Not Available | - | 497713 - 498435 | 26673.7 |
| iclr family transcriptional regulator | FD720_02385 | Not Available | + | 498820 - 499554 | 26846.5 |
| arginase | FD720_02390 | Not Available | + | 499600 - 500571 | 36058.4 |
| amidohydrolase | FD720_02395 | Not Available | - | 500800 - 502236 | 53095.4 |
| duf535 domain-containing protein | FD720_02400 | Not Available | + | 502621 - 503511 | 35187.1 |
| efflux rnd transporter permease subunit | FD720_02405 | Not Available | - | 503578 - 506628 | 111325.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD720_02410 | Not Available | - | 506632 - 507735 | 40049.4 |
| tetr/acrr family transcriptional regulator | FD720_02415 | Not Available | + | 507935 - 508546 | 23333.4 |
| nird/ygiw/ydei family stress tolerance protein | FD720_02420 | Not Available | + | 508788 - 509159 | 13055.4 |
| hypothetical protein | FD720_02425 | Not Available | + | 509164 - 509397 | 9436.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.