Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_02330 | Not Available | - | 483611 - 484165 | 19946.0 |
| chondroitinase | FD720_02335 | Not Available | - | 484300 - 487380 | 114638.0 |
| anaerobic sulfatase maturase | FD720_02340 | Not Available | + | 487640 - 488893 | 47142.0 |
| arylsulfatase | FD720_02345 | Not Available | + | 488964 - 490595 | 59895.9 |
| duf2264 domain-containing protein | FD720_02350 | Not Available | + | 490785 - 492323 | 58864.5 |
| tagatose bisphosphate family class ii aldolase | FD720_02355 | Not Available | + | 492604 - 493458 | 31329.6 |
| sugar kinase | FD720_02360 | Not Available | + | 493604 - 494578 | 36200.3 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FD720_02365 | Not Available | + | 494571 - 495203 | 22537.5 |
| dj-1/pfpi family protein | FD720_02370 | Not Available | + | 495213 - 495791 | 21442.5 |
| porin | FD720_02375 | Not Available | + | 496025 - 497560 | 56172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.