Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | FD720_02275 | Not Available | + | 471800 - 473116 | 49408.4 |
| peroxide stress protein yaaa | FD720_02280 | Not Available | - | 473217 - 473990 | 29116.2 |
| alanine:cation symporter family protein | FD720_02285 | Not Available | - | 474162 - 475589 | 51272.3 |
| duf3545 family protein | FD720_02290 | Not Available | + | 476358 - 476540 | 7512.76 |
| hemerythrin domain-containing protein | FD720_02295 | Not Available | - | 476605 - 477135 | 21284.4 |
| uracil-dna glycosylase | FD720_02300 | Not Available | - | 477245 - 477904 | 24674.1 |
| deoxyribonuclease iv | FD720_02305 | Not Available | - | 477959 - 478801 | 31183.1 |
| autonomous glycyl radical cofactor grca | FD720_02310 | Not Available | + | 479167 - 479382 | 7564.98 |
| mandelate racemase/muconate lactonizing enzyme family protein | FD720_02320 | Not Available | + | 479826 - 480968 | 42127.4 |
| hyaluronate lyase | FD720_02325 | Not Available | + | 481151 - 483571 | 91006.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.