Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pace efflux transporter | FD720_02225 | Not Available | + | 460135 - 460578 | 17186.4 |
| sigma-54-dependent fis family transcriptional regulator | FD720_02230 | Not Available | - | 460646 - 461839 | 44903.7 |
| lysine--trna ligase | FD720_02235 | Not Available | - | 462073 - 463575 | 57041.2 |
| peptide chain release factor 2 | FD720_02240 | Not Available | - | 463608 - 464706 | 41046.7 |
| single-stranded-dna-specific exonuclease recj | FD720_02245 | Not Available | - | 464865 - 466589 | 62847.8 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FD720_02250 | Not Available | - | 466694 - 467425 | 26387.8 |
| site-specific tyrosine recombinase xerd | FD720_02255 | Not Available | - | 467599 - 468495 | 34492.8 |
| flavodoxin fldb | FD720_02260 | Not Available | + | 468669 - 469193 | 19660.0 |
| branched-chain amino acid transport system ii carrier protein | FD720_02265 | Not Available | - | 469268 - 470581 | 46203.7 |
| methyltransferase | FD720_02270 | Not Available | + | 470958 - 471671 | 25742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.