Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_02175 | Not Available | - | 449097 - 449342 | 9059.86 |
| na+/h+ antiporter nhaa | FD720_02180 | Not Available | - | 449347 - 450519 | 40718.7 |
| na/pi cotransporter family protein | FD720_02185 | Not Available | + | 451007 - 452152 | 40176.4 |
| thymidylate synthase | FD720_02190 | Not Available | - | 452320 - 453171 | 32604.8 |
| prolipoprotein diacylglyceryl transferase | FD720_02195 | Not Available | - | 453371 - 454174 | 29898.0 |
| sulfite exporter taue/safe family protein | FD720_02200 | Not Available | - | 454219 - 455025 | 27530.9 |
| phosphoenolpyruvate--protein phosphotransferase | FD720_02205 | Not Available | - | 455045 - 457303 | 84110.7 |
| rna pyrophosphohydrolase | FD720_02210 | Not Available | - | 457344 - 457865 | 20841.0 |
| dna mismatch repair endonuclease muth | FD720_02215 | Not Available | + | 458491 - 459159 | 24578.7 |
| lysr family transcriptional regulator | FD720_02220 | Not Available | - | 459156 - 460034 | 32277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.