Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | FD720_21210 | Not Available | + | 4754858 - 4756636 | 67459.3 |
| stas domain-containing protein | FD720_21215 | Not Available | + | 4756694 - 4757002 | 11497.0 |
| ompa family protein | FD720_21220 | Not Available | + | 4756999 - 4757784 | 30267.0 |
| sugar abc transporter substrate-binding protein | FD720_21225 | Not Available | + | 4757781 - 4760459 | 98624.0 |
| tyrosine-protein kinase family protein | FD720_21230 | Not Available | + | 4760459 - 4761142 | 26177.7 |
| response regulator | FD720_21235 | Not Available | + | 4761139 - 4762611 | 56528.1 |
| glycosyltransferase family 4 protein | FD720_21240 | Not Available | - | 4762585 - 4763559 | 36986.0 |
| 50s ribosomal protein l17 | FD720_21245 | Not Available | - | 4763651 - 4764037 | 14536.7 |
| dna-directed rna polymerase subunit alpha | FD720_21250 | Not Available | - | 4764071 - 4765060 | 36341.5 |
| 30s ribosomal protein s4 | FD720_21255 | Not Available | - | 4765084 - 4765704 | 23395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.