Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | FD720_21110 | Not Available | - | 4735647 - 4736423 | 29074.1 |
| conjugal transfer protein trbe | FD720_21115 | Not Available | - | 4736416 - 4738818 | 90184.7 |
| conjugal transfer protein trbd | FD720_21120 | Not Available | - | 4738820 - 4739107 | 10910.5 |
| conjugal transfer protein trbc | FD720_21125 | Not Available | - | 4739117 - 4739437 | 10995.0 |
| hypothetical protein | FD720_21130 | Not Available | - | 4739506 - 4739844 | 13260.0 |
| hypothetical protein | FD720_21135 | Not Available | - | 4740596 - 4741192 | 22789.4 |
| hypothetical protein | FD720_21140 | Not Available | - | 4741424 - 4741837 | 15932.4 |
| tray domain-containing protein | FD720_21145 | Not Available | - | 4742144 - 4742335 | 7135.38 |
| helix-turn-helix transcriptional regulator | FD720_21150 | Not Available | + | 4742512 - 4743144 | 23800.0 |
| hypothetical protein | FD720_21155 | Not Available | + | 4743571 - 4744404 | 32428.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.