Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | FD720_21000 | Not Available | - | 4715091 - 4717211 | 78488.1 |
| eal domain-containing protein | FD720_21005 | Not Available | - | 4717214 - 4719139 | 71899.0 |
| sulfate adenylyltransferase | FD720_21010 | Not Available | - | 4719145 - 4719795 | 24567.6 |
| ompa family protein | FD720_21015 | Not Available | - | 4719823 - 4720413 | 21527.2 |
| tolc family outer membrane protein | FD720_21020 | Not Available | - | 4720427 - 4721737 | 48614.2 |
| hlyd family type i secretion periplasmic adaptor subunit | FD720_21025 | Not Available | - | 4721740 - 4723134 | 51702.4 |
| hypothetical protein | FD720_21040 | Not Available | - | 4725094 - 4725588 | 17943.3 |
| tetr/acrr family transcriptional regulator | FD720_21045 | Not Available | + | 4725785 - 4726255 | 17858.7 |
| lysr family transcriptional regulator | FD720_21050 | Not Available | - | 4726269 - 4727159 | 32771.5 |
| monooxygenase | FD720_21055 | Not Available | + | 4727269 - 4727577 | 11537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.